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Observation 34

Show all 34 →
Observationobservedoriginal resultmeasured

Claim · model-written summary

Each clone had a unique transcript accumulation pattern.

Outcome
unique pattern of transcript accumulatione0

Verbatim

e0

“each clone showed a unique pattern of transcript accumulation”

✓ located verbatim in the source · abstract, characters 344–405
t0

“tobacco”

✓ located after whitespace/quote normalisation · title, characters 139–146

Title

Screening of Wound-Responsive Genes Identifies an Immediate-Early Expressed Gene Encoding a Highly Charged Protein in Mechanically Wounded Tobacco Plants

K. Hara; M. Yagi; N. Koizumi; et al. Plant and Cell Physiology 2000. doi:10.1093/pcp/41.6.684

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

The RgTyDC2 transcript level was consistent with the accumulation pattern of acteoside.

Taxon
Rehmannia glutinosaRehmannia glutinosae0
Gene
RgTyDC2e3
Compound
acteosidee3
Outcome
transcript levele3
Qualifier
consistent with the accumulation patterne3

Verbatim

e0

“Rehmannia glutinosa is an important medicinal plant”

✓ located verbatim in the source · abstract, characters 0–51
e3

“the transcript level of RgTyDC2 was consistent with the accumulation pattern of acteoside in R. glutinosa”

✓ located verbatim in the source · abstract, characters 660–765

Title

Identification and Functional Characterization of Tyrosine Decarboxylase from Rehmannia glutinosa

Yuanjun Li; Yanan Wang; Longyu Huang; et al. Molecules 2022. doi:10.3390/molecules27051634

Other claims from this paper (4)
Observationobservedoriginal resultmeasured

Claim · model-written summary

DcAOX1a and DcAOX2a differed in transcript accumulation but shared a similar co-expression pattern.

Taxon
carrotDaucus carotat0
Gene
DcAOX1a and DcAOX2ae0
Outcome
differential transcript accumulatione0

Verbatim

e0

“DcAOX1a and DcAOX2a indicated a differential transcript accumulation but a similar co-expression pattern.”

✓ located verbatim in the source · abstract, characters 833–938
t0

“carrot”

✓ located verbatim in the source · title, characters 45–51

Title

Differential expression and co‐regulation of carrot AOX genes (Daucus carota)

Maria Doroteia Campos; Hélia Guerra Cardoso; Bettina Linke; et al. Physiologia Plantarum 2009. doi:10.1111/j.1399-3054.2009.01282.x

Other claims from this paper (9)

Association 20

Show all 20 →
Associationobservedoriginal resultmeasured

Claim · model-written summary

gus transcript accumulation followed the same pattern as GUS activity.

Gene
guse0
Outcome
gus transcriptse0
Comparator
GUS activitye0

Not reportedDirection

Verbatim

e0

“gus transcripts accumulated in a same pattern with the GUS activity.”

✓ located verbatim in the source · abstract, characters 881–949
t0

“Cotton”

✓ located verbatim in the source · title, characters 73–79

Title

Expression Characteristics of Tobacco Tapetum-Specific Promoter pTA29 in Cotton

Meng Yin 2008

Other claims from this paper (5)
Associationobservedoriginal resultmeasured

Claim · model-written summary

The similar promoter activity pattern correlated with similar gus transcript accumulation.

Taxon
Nicotiana tabacum and Arabidopsis thalianaArabidopsis thalianaNicotiana tabacume1
Gene
gus transcripte0
Outcome
similar accumulation of gus transcripte0

Not reportedDirection

Verbatim

e0

“which was correlated with a similar accumulation of gus transcript and spore protein content”

✓ located verbatim in the source · abstract, characters 1135–1227
e1

“Nicotiana tabacum and Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 121–163

Title

Differential activation and conserved vegetative cell-specific activity of a late pollen promoter in species with bicellular and tricellular pollen

Colin Eady; Keith Lindsey; David Twell The Plant Journal 1994. doi:10.1046/j.1365-313x.1994.05040543.x

Other claims from this paper (6)
Associationobservedoriginal resultmeasured

Claim · model-written summary

NnSOD, NnCAT and some NnPOD transcripts followed a pattern similar to enzyme activity.

Taxon
lotusLotust0
Gene
NnSODe0
Outcome
transcript accumulation patterne0
Qualifier
similar transcript accumulation pattern with enzyme activitye0

Not reportedDirection

Verbatim

t0

“lotus (Nelumbo nucifera Gaertn.)”

✓ located after whitespace/quote normalisation · title, characters 35–67
e0

“NnSOD (104590242), NnCAT (104609297), and some NnPOD genes showed a similar transcript accumulation pattern with enzyme activity.”

✓ located verbatim in the source · abstract, characters 1154–1283

Title

Biochemical Mechanism of Fresh-Cut Lotus (Nelumbo nucifera Gaertn.) Root with Exogenous Melatonin Treatment by Multiomics Analysis

Ting Min; Keyan Lu; Jinhui Chen; et al. Foods 2022. doi:10.3390/foods12010044

Other claims from this paper (10)

Intervention effect 18

Show all 18 →
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Arath;WEE1 expression altered native WEE1 transcript accumulation through the cell cycle.

Treatment
Arath;WEE1 expressione0
Gene
native WEE1e0
Outcome
pattern of native WEE1 transcript accumulatione0
Direction
alterede0

Not reportedTaxonComparator

Verbatim

e0

“the pattern of native WEE1 transcript accumulation through the cell cycle was altered by Arath;WEE1 expression, suggesting feedback inhibition of native WEE1 transcription.”

✓ located verbatim in the source · abstract, characters 1145–1317

Title

Expression of Arabidopsis WEE1 in tobacco induces unexpected morphological and developmental changes

Ilario Siciliano; Anne Lentz Grønlund; Hana Ševčíková; et al. Scientific Reports 2019. doi:10.1038/s41598-019-45015-3

Other claims from this paper (7)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Erysiphe challenge enhanced pea lignin pathway transcript accumulation.

Treatment
E. pisi challengee0
Interactor
E. pisiErysiphe pisie0pathogen
Outcome
Transcript accumulation patterne0
Direction
enhancede0

Not reportedComparator

Verbatim

t0

“Pea”

✓ located verbatim in the source · title, characters 86–89
e0

“Transcript accumulation pattern of some vital genes in the lignin biosynthetic pathway in pea under E. pisi challenge indicated enhanced activation of the pathway”

✓ located verbatim in the source · abstract, characters 526–688

Title

Trichoderma asperellum (T42) and Pseudomonas fluorescens (OKC)-Enhances Resistance of Pea against Erysiphe pisi through Enhanced ROS Generation and Lignifications

Jai S. Patel; Ravindra N. Kharwar; Harikesh B. Singh; et al. Frontiers in Microbiology 2017. doi:10.3389/fmicb.2017.00306

Other claims from this paper (7)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethylene promoted JET 1 transcript accumulation.

Taxon
Sambucus nigraSambucus nigrat0
Treatment
ethylenee0
Gene
JET 1e0
Outcome
Accumulation of the JET 1 transcripte0
Direction
promotede0

Not reportedComparator

Verbatim

e0

“Accumulation of the JET 1 transcript is promoted by ethylene”

✓ located verbatim in the source · abstract, characters 497–557
t0

“Sambucus nigra”

✓ located verbatim in the source · title, characters 105–119

Title

Characterisation and accumulation pattern of a mRNA encoding an abscission-related β-1, 4-glucanase from Sambucus nigra

Jane Taylor; Simon A. Coupe; Steve Picton; et al. Lancaster EPrints (Lancaster University) 1994

Other claims from this paper (8)

Mechanism 14

Show all 14 →
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The pattern of transcript accumulation suggests that PGL apple seedlings alter many physiological and metabolic processes such as sorbitol metabolism, osmoprotectant production and abscisic acid activity.

Material
PGL seedlingse0
Outcome
physiological and metabolic processese0
Qualifier
pattern of transcript accumulation suggestse0

Verbatim

e0

“This pattern of transcript accumulation suggests PGL seedlings alter many physiological and metabolic processes such as sorbitol metabolism, osmoprotectant production, and abscisic acid activity”

✓ located verbatim in the source · abstract, characters 900–1094
t0

“apple”

✓ located verbatim in the source · title, characters 70–75

Title

High-throughput sequencing reveals that pale green lethal disorder in apple (Malus) stimulates stress responses and affects senescence

Benjamin Orcheski; Susan Brown Tree Genetics & Genomes 2016. doi:10.1007/s11295-016-1097-5

Other claims from this paper (2)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

CVOMT and EOMT transcript accumulation followed the same pattern as enzyme activity, indicating transcriptional regulation of methylchavicol biosynthesis.

Taxon
Ocimum basilicum L.Ocimum basilicume0
Gene
CVOMT and EOMTe3
Outcome
transcript accumulatione3
Qualifier
regulated at the transcriptional levele3

Verbatim

e0

“basil (Ocimum basilicum L.) EMX-1 chemotype”

✓ located verbatim in the source · abstract, characters 341–384
e3

“The CVOMT and EOMT transcript accumulation also followed the same pattern as its respective enzyme activity, indicating that methylchavicol biosynthesis is regulated at the transcriptional level”

✓ located verbatim in the source · abstract, characters 681–875

Title

Regulation of essential oil biosynthesis in basil (Ocimum basilicum L.)

Cícero Deschamps Purdue e-Pubs (Purdue University System) 2002

Other claims from this paper (9)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The mRNA accumulation pattern in tomato is inherent to the transcript rather than attributable to the promoter.

Outcome
mRNA accumulation patterne1
Qualifier
inherent to the transcript and not attributable to the promotere1

Verbatim

e0

“Grafting experiments with a naturally occurring dominant gain-of-function leaf mutation in tomato were used to demonstrate long-distance movement of mutant messenger RNA (mRNA) into wild-type scions”

✓ located verbatim in the source · abstract, characters 146–344
e1

“The stock-specific pattern of mRNA expression was graft transmissible, indicating that the mRNA accumulation pattern is inherent to the transcript and not attributable to the promoter”

✓ located verbatim in the source · abstract, characters 346–529

Title

Developmental Changes Due to Long-Distance Movement of a Homeobox Fusion Transcript in Tomato

Minsung Kim; Wynnelena Canio; Sharon Kessler; et al. Science 2001. doi:10.1126/science.1059805

Other claims from this paper (3)

Lexical search (BM25). All words must match; if nothing does, any word. Organism names also match every spelling of the same organism. No semantic search yet.